Back to Table of contents

Primeur weekly 2014-10-06

The Cloud

Oracle unveils latest Cloud applications at Oracle OpenWorld ...

Fujitsu and Midokura strengthen partnership to jointly develop global Cloud business ...

EuroFlash

Altera Programmable Logic inspires innovation at 2014 Maker Faire Europe ...

Human Brain Project (HBP) Pre-Commercial Procurement under way ...

UberCloud to host NICE software solutions in the UberCloud marketplace ...

Quantum environmentalism ...

Atos to initiate buyout offer followed by a squeeze-out on Bull's shares ...

USFlash

CoolIT Systems liquid cools Intel 'Cherry Creek' supercomputer for UNLV deployment at SUPERNAP to boost scientific research ...

Altera and ARM expand strategic partnership for SoC development tools ...

New report explores the value of government leadership in supercomputing for industrial competitiveness ...

Australian Institute for Bioengineering and Nanotechnology to roll out supercomputer ...

Iowa State physicists among teams preparing for new Energy Department supercomputer ...

Four projects headed by University of Wyoming researchers selected for supercomputer use ...

ICL becomes the newest Intel Parallel Computing Center (IPCC) ...

Laying the groundwork for data-driven science ...

Cray launches next-generation supercomputer and cluster systems ...

DataDirect Networks introduces industry's first enterprise-class scale-out parallel file system appliance, making customers’ Big Data deployments effortless and infinitely scalable ...

Indiana University boots up new supercomputer ...

SDSC granted $1.3 million award for 'SeedMe.org' data sharing infrastructure ...

Brain cell linker dependence shown by XSEDE/TACC supercomputer simulations ...

A deep dive into plasma ...

University of Virginia's new $2.4 million computing cluster to enhance and facilitate Big Data research ...

Carnegie Mellon leads new NSF project mining educational data to improve learning ...

A new approach to on-chip quantum computing ...

Princeton scientists observe elusive particle that is its own antiparticle ...

HP extends benefits of ARM architecture into the data centre with new servers ...

IBM provides clients superior alternative to x86-based commodity servers ...

Oracle announces Exalytics In-Memory Machine X4-4 ...

Oracle introduces Oracle Virtual Networking support for OpenStack ...

National Institute of Biomedical Genomics (NIBMG) deploys DataDirect networks storage to achieve significant oerformance improvement in world-class genomics research and collaboration for oral cancer ...

SDSC granted $1.3 million award for 'SeedMe.org' data sharing infrastructure

2 Oct 2014 San Diego - Researchers at the San Diego Supercomputer Center (SDSC) at the University of California, San Diego have received a three-year, $1.3 million award from the National Science Foundation (NSF) to develop a web-based resource that lets scientists seamlessly share and access preliminary results and transient data from research on a variety of platforms, including mobile devices.

Called SeedMe - short for 'Swiftly Encode, Explore and Disseminate My Experiments' - the new award is from the NSF's Data Infrastructure Building Blocks (DIBBs) programme, part of the foundation's Cyberinfrastructure Framework for 21st Century Science and Engineering (CIF21). The DIBBs programme encourages development of robust and shared data-centric cyberinfrastructure capabilities to promote interdisciplinary and collaborative research.

The newly funded project, called 'Ubiquitous Access to Transient Data and Preliminary Results via the SeedMe Platform' and to begin October 1, 2014, builds on the foundation made possible by an $810,000 NSF grant awarded under a separate programme in late 2012 to develop a web-based architecture that focused on sharing and accessing visualization related outputs.

"The current SeedMe project highlighted the need for additional capabilities and several feature requests from our current users", stated Amit Chourasia, a senior visualization scientist at SDSC and principal investigator for the project. "We will use the lessons learned from the current SeedMe project and extend it to make it more general and applicable to a broader research areas and researchers, while allowing SeedMe to be developed as a modular web‑based, feature-rich cyberinfrastructure."

"SeedMe provides an essential yet missing component in current high-performance computing as well as Cloud computing infrastructures", added SDSC Director Michael Norman, co-PI on the project. "We view this as an important building block project because computational simulations have become an indispensable tool across a very diverse array of science and engineering investigations and having most access to latest results is extremely important for diagnosis, validation and swift iteration of preliminary results saving researchers their precious time as well as allowing them to utilize computational resources efficiently by catching errors sooner."

Current methods for sharing and assessing transient data and preliminary results are cumbersome, labour intensive, and largely unsupported by useful tools and procedures, according to the SDSC researchers.

"Each research team is forced to create their own scripts and ad hoc procedures to push data from system to system, and user to user", stated Amit Chourasia. "These efforts often rely on email and other means, despite the ubiquity of much more flexible dynamic web-based technologies and the impressive display and interaction abilities of today's mobile devices. SeedMe's goal is to convert a slow, manual, serial, error prone, repetitive, and redundant sharing and assessment process into a streamlined automatable process that could be easily integrated into existing scientific applications and procedures."

SeedMe's building blocks will be broadly applicable to a diverse set of scientific and engineering communities. "In addition, the SeedMe platform will be open sourced so that it can be replicated and extended by a wide range of users, from students to professional researchers", stated Amit Chourasia. "The central SeedMe website will be a common resource for sharing transient data and preliminary results that will enable significant time saving for researchers by providing a simple and ready to use cyberinfrastructure for collaboration. The website will serve as an open web accessible and searchable archive of results and reusable content, making it also suitable for educational and outreach programmes for scientific and wider audiences."

The NSF DIBBs award also calls for SeedMe to organize and conduct tutorials, webinars, and other presentations to promote the resource and train new users. Internships will be provided to high school and undergraduate students so they can learn more about new web technologies and a diverse range of research opportunities.

As part of the current award, SeedMe is now inviting researchers from industry and academia, and across numerous domains, to familiarize themselves with the resources easy-to-use functionality for sharing science results with their peers or the public at large.

"This new award will allow us to not only continue but accelerate those efforts to demonstrate how SeedMe enables convenient sharing and streaming of data-intensive scientific research, especially within research teams", stated Amit Chourasia.

The NSF award number is 1443083 and runs until an estimated date of September 30, 2017. In addition to Amit Chourasia and Michael Norman, the SeedMe project team includes David Nadeau, and other staff at SDSC.
Source: San Diego Supercomputer Center - SDSC

Back to Table of contents

Primeur weekly 2014-10-06

The Cloud

Oracle unveils latest Cloud applications at Oracle OpenWorld ...

Fujitsu and Midokura strengthen partnership to jointly develop global Cloud business ...

EuroFlash

Altera Programmable Logic inspires innovation at 2014 Maker Faire Europe ...

Human Brain Project (HBP) Pre-Commercial Procurement under way ...

UberCloud to host NICE software solutions in the UberCloud marketplace ...

Quantum environmentalism ...

Atos to initiate buyout offer followed by a squeeze-out on Bull's shares ...

USFlash

CoolIT Systems liquid cools Intel 'Cherry Creek' supercomputer for UNLV deployment at SUPERNAP to boost scientific research ...

Altera and ARM expand strategic partnership for SoC development tools ...

New report explores the value of government leadership in supercomputing for industrial competitiveness ...

Australian Institute for Bioengineering and Nanotechnology to roll out supercomputer ...

Iowa State physicists among teams preparing for new Energy Department supercomputer ...

Four projects headed by University of Wyoming researchers selected for supercomputer use ...

ICL becomes the newest Intel Parallel Computing Center (IPCC) ...

Laying the groundwork for data-driven science ...

Cray launches next-generation supercomputer and cluster systems ...

DataDirect Networks introduces industry's first enterprise-class scale-out parallel file system appliance, making customers’ Big Data deployments effortless and infinitely scalable ...

Indiana University boots up new supercomputer ...

SDSC granted $1.3 million award for 'SeedMe.org' data sharing infrastructure ...

Brain cell linker dependence shown by XSEDE/TACC supercomputer simulations ...

A deep dive into plasma ...

University of Virginia's new $2.4 million computing cluster to enhance and facilitate Big Data research ...

Carnegie Mellon leads new NSF project mining educational data to improve learning ...

A new approach to on-chip quantum computing ...

Princeton scientists observe elusive particle that is its own antiparticle ...

HP extends benefits of ARM architecture into the data centre with new servers ...

IBM provides clients superior alternative to x86-based commodity servers ...

Oracle announces Exalytics In-Memory Machine X4-4 ...

Oracle introduces Oracle Virtual Networking support for OpenStack ...

National Institute of Biomedical Genomics (NIBMG) deploys DataDirect networks storage to achieve significant oerformance improvement in world-class genomics research and collaboration for oral cancer ...