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Primeur weekly 2019-09-16

Focus

France is preparing to host an EuroHPC exascale system in 2022/2023 ...

Crowd computing

Purdue's nanoHUB@Home project lets anyone contribute to cutting-edge nanotechnology research - no PhD required ...

Quantum computing

ABN AMRO and QuSoft partnership to explore the power of quantum software ...

Q-CTRL leaps into the global top-10 of quantum start-ups ...

Quantum computers by AQT and University of Innsbruck leverage Cirq for quantum algorithm development ...

IBM and Fraunhofer join forces on Quantum Computing Initiative for Germany ...

Focus on Europe

GENCI to deploy new strategic plan 2019-2023 ...

IBM and SKODA AUTO University collaborate on new digital skills for students ...

Middleware

ORNL staff to highlight OpenACC's role in HPC at Annual Meeting ...

Hardware

Panasas High-performance data storage supports environmentally responsible energy exploration at Magseis Fairfield ...

Supermicro expands high-performance SuperWorkstation system portfolio with launch of new solution ...

National Science Foundation $1,4 million grant will help develop cyberinfrastructure across Midwest ...

Applications

Brain-inspired computing could tackle big problems in a small way ...

From the subatomic to the intergalactic: scientists gather in Leicester to share supercomputer results ...

Artificial intelligence helps to predict hybrid nanoparticle structures ...

Computer simulations predicted structure of gold cluster that chops carbon dioxide ...

Forging new frontiers in AI education: Diercks Hall opens at Milwaukee School of Engineering ...

AI to help drive engine efficiencies on the road ...

ANSYS and LS-DYNA creator Livermore Software Technology Corporation sign definitive acquisition agreement ...

New computing education group joins TACC ...

GPUs power GE code at OLCF hackathons ...

The Cloud

Mellanox to ship record of more than one million ConnectX adapters in Q3 2019 ...

SUSE enhances delivery of modern containerized and Cloud native applications ...

Univa expands Navops launch multi-Cloud automation to the Slurm community ...

Univa unveils Navops Launch 2.0 ...

GPUs power GE code at OLCF hackathons


GEnx high+low pressure turbine rendering. Image Credit: GE Research.
12 Sep 2019 Oak Ridge - The ability to simulate turbulent phenomena using high-performance computing (HPC) can provide industry with important insights for efficient engine design. Second only to the ability to perform these critical simulations is the speed at which they run. If a company can run a model more quickly, the number of possible design iterations increases, ultimately leading to a better end design.
Pictured here are (back row) mentors Piotr Luszczek and Kyle Friedline with (front row) Eduardo Jourdan, Feilin Jia, and Carlos Velez at the Brookhaven National Laboratory Hackathon in September 2018. Image Credit: Brookhaven National Laboratory.

General Electric (GE) has used the leadership-scale HPC resources at the Oak Ridge Leadership Computing Facility (OLCF) since 2010 to determine how to make turbine engines for jets and power plants more energy efficient. A crystal ball of sorts, HPC can give companies such as GE a major competitive boost. The OLCF, a US Department of Energy (DOE) Office of Science User Facility located at DOE's Oak Ridge National Laboratory, is home to the 200-petaflop IBM AC922 Summit, the world's most powerful and smartest supercomputer for open science.

In addition to using the leadership supercomputers at the OLCF, GE recently began leveraging OLCF hackathons - intense workshops with domain scientists, software engineers, and compiler experts who mentor attendees on how to adapt their codes to use GPUs and take full advantage of Summit's large-scale computing capabilities. Carlos Velez, lead research engineer in the Thermo-Sciences Organization at GE's Global Research Center, attended two OLCF hackathons this year with University of Kansas (KU) colleagues, ultimately realizing speed-ups of 50- to 300-fold on GE's GENESIS code and far greater scalability.

To understand how an engine will behave, companies such as GE can use computational fluid dynamics (CFD) simulations to predict the behavior of the turbulence - the unsteady flow of air or water - around the rows of blades in large gas turbines and jet engines. These kinds of simulations require a massive amount of compute time because they must be solved over an extremely large range of length and timescales.

Even with the competitive speeds and scalability of current commercial CFD software suites - which predominantly run on CPUs - many of GE's ultimate simulation and design challenges are out of reach. An entire multipassage, multirow turbine with around 1000 individual blades would require years of continued HPC simulations to complete a single design using a commercial solver.

The GENESIS code, however, can tell researchers about how turbulence flows down the multiple rows of blades in one of its engines or turbines. GENESIS is built on the hp-adaptive Multi-physics Simulation Code (hpMusic) from ZJ Wang, Spahr Professor of Aerospace Engineering at KU.

The CFD calculations involved in such simulations typically employ a specific type of algorithm called the finite volume method, in which the averages taken for the variables in a predetermined space called a control volume are calculated based on the previous averages and characteristics of their neighbours.

But hpMusic/GENESIS operates a little differently. The code uses the flux reconstruction method, which combines the advantages of the finite volume and finite element methods. In a finite element method, multiple variables at a set of solution points in a predetermined space - called an element - are computed. Finite element codes are computationally intensive, and most of the operations require only local information, making them well-suited for GPUs. If a simulation was a weather event, the finite volume method would act as a lone storm chaser, but the finite element method would have 100 broadcasters in different locations reporting on the storm.

The hpMusic/GENESIS code - a powerhouse finite element CFD code - was seemingly tailor-made for GPUs. But the researchers first needed to enable hpMusic/GENESIS to run using GPUs.

"We didn't have the experience running on GPUs, and even if we did, GE's internal GPU resource is not like the OLCF's Summit", Carlos Velez stated. "That's one of the reasons we were motivated to try to gain access to some of the national laboratory supercomputers and to attend the OLCF hackathons."

The GE team - in a strategic partnership with KU - decided to take the non-proprietary hpMusic code to an OLCF hackathon with the goal of merging a GPU-accelerated version of it into GE's internal GENESIS code.

The first OLCF hackathon that GE and KU researchers attended was at Brookhaven National Laboratory last fall. Because hpMusic ran solely on CPUs, the team's goal was to get some part of it - specifically, a computationally intensive portion - to run on GPUs.

The scientists were successful, gaining a hundredfold speedup on a small piece of hpMusic using the CUDA programming model with the help of their hackathon mentors - Piotr Luszczek, research director at the University of Tennessee–Knoxville, and Kyle Friedline, research assistant at the University of Delaware - and NVIDIA representative Maximilian Katz. Over the next year at KU, ZJ Wang led a team of students who successfully ported the rest of hpMusic to GPUs.

"Whatever we achieve in hpMusic will be available very soon for GENESIS because of the ongoing partnership", ZJ Wang stated. But GE isn't the only beneficiary. The hpMusic code could be licensed by other corporations and provide speedups to codes beyond GENESIS, such as those used in the aerospace industry.

GE was eager to port the rest of the GENESIS code to GPUs and scale it to run on many more nodes. Through the OLCF's industry partnership programme ACCEL, or Accelerating Competitiveness through Computational Excellence, the GE team applied for and was awarded a Director's Discretionary allocation of time on Summit. The team has since completed numerous scaling studies.

"Using the GPUs on Summit, we experienced speed-ups in our scaling studies ranging from 50- to 300-fold", Carlos Velez stated. "That's a month-long simulation done in just over 2 hours. That, for us, is a game changer."

Carlos Velez and ZJ Wang said the resulting speed-ups will allow them to crank out more simulations in the same amount of time or to perform larger, higher-resolution simulations to capture the small scales needed to correctly predict turbulence.

“We're used to simulations that are fast but very inaccurate", Carlos Velez stated. "Now we can get better predictive accuracy and higher resolution, which are needed for the kind of physics we're trying to resolve. And we do it within a run time that fits very nicely within our design cycle."

The GE researchers were eager to attend another hackathon to continue gaining experience for further code optimization.

"People were asking me, 'Hey, when's the second one? When are you going to the second one?' It was a pull. There was no push needed", Carlos Velez stated.

So in June, the GE/KU team attended a second OLCF hackathon at MIT to further optimize hpMusic. To improve the code's scaling efficiency, the team simultaneously increased its number of jobs and the number of GPUs running those jobs.

For Carlos Velez and ZJ Wang, the benefits of the hackathons have been multifaceted.

"The most difficult part has been learning the concepts behind GPU programming", Carlos Velez stated. "But once we absorbed the major learnings from these hackathons, we spread these concepts throughout hpMusic and subsequently GENESIS."

It took time, but now GE can perform much more detailed high-fidelity simulations, giving the company a competitive advantage in the turbine market.

"The speed-up obtained accelerating GENESIS by GPUs will change our intractable design challenges from far-distant goals to near-term simulation capabilities", Carlos Velez stated. "The hackathons have catapulted our ability to use GPUs, and that is helping us design more efficient turbines and jet engines, which has a direct impact on our competitiveness."

The OLCF hackathons have also demonstrated the benefits of investing in GPU computing.

Dave Kepczynski, chief information officer for GE Research, stated: "This hackathon provided us with invaluable performance data, demonstrating a 50- to 300-fold speed-up and underscoring the importance of investing in GPUs and GPU-accelerated codes as we finalize the design for our next generation of internal HPC systems."

Eric Tucker, senior director of Digital Technologies at GE Research, stated: "If done well, GPU-accelerated software can lead directly to higher-fidelity simulations and the ability to either increase the number of design alternatives or reduce the overall time considered associated with new product development."

The team plans to attend at least one hackathon each year to leverage the mentors' experience and expertise to help optimize the codes further.

"At the hackathons, we are learning from seasoned computer scientists who have been with GPUs from the beginning", Carlos Velez stated. "Their expertise is part of what makes these events truly invaluable."

Contributors to this project include Kyle Friedline, Piotr Luszczek, Carlos Velez, ZJ Wang, Feilin Jia, Eduardo Jourdan, and Dheeraj Kapilavai.

Source: Oak Ridge Leadership Computing Facility - OLCF

Back to Table of contents

Primeur weekly 2019-09-16

Focus

France is preparing to host an EuroHPC exascale system in 2022/2023 ...

Crowd computing

Purdue's nanoHUB@Home project lets anyone contribute to cutting-edge nanotechnology research - no PhD required ...

Quantum computing

ABN AMRO and QuSoft partnership to explore the power of quantum software ...

Q-CTRL leaps into the global top-10 of quantum start-ups ...

Quantum computers by AQT and University of Innsbruck leverage Cirq for quantum algorithm development ...

IBM and Fraunhofer join forces on Quantum Computing Initiative for Germany ...

Focus on Europe

GENCI to deploy new strategic plan 2019-2023 ...

IBM and SKODA AUTO University collaborate on new digital skills for students ...

Middleware

ORNL staff to highlight OpenACC's role in HPC at Annual Meeting ...

Hardware

Panasas High-performance data storage supports environmentally responsible energy exploration at Magseis Fairfield ...

Supermicro expands high-performance SuperWorkstation system portfolio with launch of new solution ...

National Science Foundation $1,4 million grant will help develop cyberinfrastructure across Midwest ...

Applications

Brain-inspired computing could tackle big problems in a small way ...

From the subatomic to the intergalactic: scientists gather in Leicester to share supercomputer results ...

Artificial intelligence helps to predict hybrid nanoparticle structures ...

Computer simulations predicted structure of gold cluster that chops carbon dioxide ...

Forging new frontiers in AI education: Diercks Hall opens at Milwaukee School of Engineering ...

AI to help drive engine efficiencies on the road ...

ANSYS and LS-DYNA creator Livermore Software Technology Corporation sign definitive acquisition agreement ...

New computing education group joins TACC ...

GPUs power GE code at OLCF hackathons ...

The Cloud

Mellanox to ship record of more than one million ConnectX adapters in Q3 2019 ...

SUSE enhances delivery of modern containerized and Cloud native applications ...

Univa expands Navops launch multi-Cloud automation to the Slurm community ...

Univa unveils Navops Launch 2.0 ...