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Primeur weekly 2019-04-08

Focus

Fortissimo initiative ready to continue the HPC experience for SMEs ...

Quantum computing

Teams to build new algorithms and software tools for emerging quantum systems ...

Focus on Europe

Piz Daint takes on Tier 2 function in Worldwide LHC Computing Grid ...

Doron Prize 2019 goes to Thomas Schulthess ...

ISC 2019 is now open for registration ...

PRACE 18th Call for Proposals welcomes 2 new HPC systems and includes a Pilot Phase with the Fenix federated data infrastructure ...

PRACE SHAPE 9th Call for Applications is open from 1 April 2019 until 31 May 2019 ...

Middleware

The Leibniz Supercomputing Centre joins the OpenMP effort ...

Altair acquires Cambridge Collaborative's SEAM software, expanding solver portfolio ...

Hardware

DDN PartnerLink recognized in CRN's 2019 Partner Program Guide ...

PLDA announces two innovative vDMA engine IP solutions, delivering robust performance and scalability across a PCIe link or AMBA AXI fabric ...

Hyperion Research reports HPC server market beats forecast for full-year 2018 ...

Intel announces broadest product portfolio for moving, storing and processing data ...

Intel driving data-centric world with new 10nm Intel Agilex FPGA family ...

Intel appoints George S. Davis as Executive Vice President and Chief Financial Officer ...

Indiana University's data centre upgrades, two additional designs approved by Board of Trustees ...

Penguin Computing designs now available with new 2nd generation Intel Xeon Scalable processors expanding options for data centre, HPC, and AI ...

Applications

New heart valve modelling technique enables customized medical care for patients ...

Supercomputers help supercharge protein assembly ...

Supercomputers aid our understanding of complex brain waves ...

Netherlands Organisation for Scientific Research launches new call & matchmaking meeting for Energy System Integration ...

West Virginia University revs up computer resources to help move region forward ...

Rocket fuel that's cleaner, safer and still full of energy ...

Getting a big look at tiny particles ...

The Cloud

Atos and Google Cloud inaugurate unique artificial intelligence lab in France ...

Pixeom announces $15 million funding from Intel Capital, National Grid Partners and others for its software defined edge computing platform ...

New heart valve modelling technique enables customized medical care for patients


A computational model of the heart's mitral valve pre-surgery. The new imaging technology is so accurate it can be used in a clinical setting to provide patient-specific models, so surgeons can tailor treatments for mitral valve diseases on a case by case basis.
4 Apr 2019 Austin - The research team of Professor Michael Sacks, Professor of Biomedical Engineering, Oden Institute for Computational Engineering and Science (ICES), has developed a new non-invasive technique for simulating repairs to the heart's mitral valve with levels of accuracy reliable enough for use in a clinical setting. Mitral valve (MV) disease is one of the most common valve-related heart conditions, newly diagnosed in five million Americans each year. Left unchecked, MV disease can lead to heart failure and/or stroke. This advance in computational modeling technology allows surgeons to provide patient-specific treatments, a development that will improve the long-term efficacy of current medical approaches.

Michael Sacks, a professor of Biomedical Engineering at UT Austin, and his team outlined their computational modelling technique for imaging MV leaflets - flaps located on the base of the valve that open and close to regulate blood flow from the left atrium to left ventricle of the heart - in recent issues of the International Journal for Numerical Methods in Biomedical Engineering and the Annals of Biomedical Engineering .

The MV plays a crucial role in maintaining healthy blood flow in the heart, but normal function can be compromised in a number of ways. For instance, heart attacks may disrupt the MV leaflets' capacity to close properly, resulting in blood leaking back into the heart's left atrium. The importance of healthy MV function is thus widely understood within the medical community, but there is not a consensus on how best to treat common MV disorders such as regurgitation, prolapse and mitral valve stenosis.

Until now, there has been a lack of accurate modelling approaches available to surgeons for predicting the best surgical methods to restore MV function.

"Heart valves are very difficult to study. They are complex structures that move incredibly fast and are located inside the heart, making them extremely difficult to image", stated Michael Sacks, who also serves as director of the James T. Willerson Center for Cardiovascular Modeling and Simulation in the university's Oden Institute for Computational Engineering and Sciences. "Our new computational model provides surgeons with a tool for the prediction of post-surgical outcomes from clinically obtained pre-surgical data alone."

Michael Sacks has spent most of his academic career analyzing and modelling heart valve function. Recent advances in computational and 3D imaging technologies have made it possible for Michael Sacks and his team to non-invasively and accurately acquire the in vivo - or living - geometry of the MV leaflets in patients from real-time 3D echocardiography - a clinical technique that uses sound waves to monitor heart function.

The UT team's computational model was developed in collaboration with researchers from Penn Medicine and Georgia Tech.

"Because we run high-fidelity patient-specific models, the computational demands are substantial, and the use of TACC allows us to explore various modeling approaches in a much more efficient manner", Michael Sacks stated. "We can now explore in-silico in days what used to take weeks or even months to simulate."

Michael Sacks has been an active user of advanced computing resources from the Texas Advanced Computing Center (TACC) at UT Austin since 2011. For this research, Michael Sacks and his research team used TACC's Lonestar5 and Stampede2 supercomputers.

"Our models combined the complete 3D geometry of the mitral valve in the open and closed states, making possible an unparalleled level of predictive accuracy", Michael Sacks stated. "To model the MV leaflets, we then integrated into the MV models the structure and mechanical properties of the internal constituents, such as the collagen fibers which make up most of the valve, to develop attribute-rich complete MV models."

Several studies have shown significant deficiencies in the long-term success of current surgical approaches to treating common heart valve diseases. Up to 60 percent of patients who have undergone MV regurgitation surgery report recurrence just two years after the surgery.

"Cardiac surgeons must decide upon the best possible treatment for heart valve repair without knowing all the facts", stated Robert Gorman, professor of surgery in the Perelman School of Medicine at the University of Pennsylvania and a key collaborator on the study. "Most rely on their own experiences or how they were taught to perform valve repair surgery in medical school."

With the researchers' new computational predictive technique, surgeons won't have to take the previous one-size-fits-all approach to MV leaflet repair.

Michael Sacks stated: "The current computational model is a step forward because it utilizes and is derived from patient-specific imaging data. We can now accurately predict what the post-surgical state of the microvalve will be based on pre-surgical data."

"The computational modeling tool we've developed will eliminate a lot of the uncertainty and allow for patient specificity", Robert Gorman stated. "This will be transformative for those working in the field."

The next steps for Michael Sacks and his research team is to conduct multi-center trials as part of commercializing their technique.

"Once heart surgeons gain access to this tool in a clinical setting, we anticipate significant improvements in the long-term well-being of patients who've undergone mitral valve surgery", he stated.

The study was funded by the National Institutes of Health.
Source: University of Texas at Austin, Texas Advanced Computing Center - TACC

Back to Table of contents

Primeur weekly 2019-04-08

Focus

Fortissimo initiative ready to continue the HPC experience for SMEs ...

Quantum computing

Teams to build new algorithms and software tools for emerging quantum systems ...

Focus on Europe

Piz Daint takes on Tier 2 function in Worldwide LHC Computing Grid ...

Doron Prize 2019 goes to Thomas Schulthess ...

ISC 2019 is now open for registration ...

PRACE 18th Call for Proposals welcomes 2 new HPC systems and includes a Pilot Phase with the Fenix federated data infrastructure ...

PRACE SHAPE 9th Call for Applications is open from 1 April 2019 until 31 May 2019 ...

Middleware

The Leibniz Supercomputing Centre joins the OpenMP effort ...

Altair acquires Cambridge Collaborative's SEAM software, expanding solver portfolio ...

Hardware

DDN PartnerLink recognized in CRN's 2019 Partner Program Guide ...

PLDA announces two innovative vDMA engine IP solutions, delivering robust performance and scalability across a PCIe link or AMBA AXI fabric ...

Hyperion Research reports HPC server market beats forecast for full-year 2018 ...

Intel announces broadest product portfolio for moving, storing and processing data ...

Intel driving data-centric world with new 10nm Intel Agilex FPGA family ...

Intel appoints George S. Davis as Executive Vice President and Chief Financial Officer ...

Indiana University's data centre upgrades, two additional designs approved by Board of Trustees ...

Penguin Computing designs now available with new 2nd generation Intel Xeon Scalable processors expanding options for data centre, HPC, and AI ...

Applications

New heart valve modelling technique enables customized medical care for patients ...

Supercomputers help supercharge protein assembly ...

Supercomputers aid our understanding of complex brain waves ...

Netherlands Organisation for Scientific Research launches new call & matchmaking meeting for Energy System Integration ...

West Virginia University revs up computer resources to help move region forward ...

Rocket fuel that's cleaner, safer and still full of energy ...

Getting a big look at tiny particles ...

The Cloud

Atos and Google Cloud inaugurate unique artificial intelligence lab in France ...

Pixeom announces $15 million funding from Intel Capital, National Grid Partners and others for its software defined edge computing platform ...