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Primeur weekly 2017-03-13

Focus

Health-RI initiative to federate medical metadata across nationwide infrastructure ...

Crowd computing

Berkeley Lab supercomputer centre contributes to Planet Nine-seeking citizen science project ...

Major French bank now supporting humanitarian research through IBM's World Community Grid ...

NVIDIA Jetson TX2 enables AI at the edge ...

Quantum computing

Legacy of brilliant young scientist is a major leap in quantum computing ...

Focus on Europe

Addressing the gender gap in the UK HPC community ...

Middleware

Bright Computing supplies Bright Cluster Manager to Fox Chase Cancer Center ...

Hardware

E4 Computer Engineering and Wistron Corporation introduce new energy-efficient OCP platform based on IBM POWER CPUs coupled with NVIDIA Tesla Pascal GPUs with NVLink ...

Fujitsu in plans for RIKEN AIP-FUJITSU Collaboration Center ...

Bullion, high-end x86 server from Atos, beats worldwide performance record ...

Mellanox enables industry's first PCIe Gen-4 OpenPOWER-based Rackspace OCP server with 100Gb/s connectivity ...

Mellanox announces industry-leading OCP-based ConnectX-5 adapters for Qualcomm Centriq 2400 processor-based platforms ...

Supermicro's Silicon Valley state-of-the-art server and storage manufacturing facilities go green ...

AMD previews "Naples" high-performance server processor and prepares to return innovation and choice to the data centre in Q2 2017 ...

Applications

iRODS Consortium welcomes Intel as newest member ...

SDSC achieves record performance in seismic simulations with Intel ...

UC San Diego to develop cyberinfrastructure for NASA's ICESat-2 data ...

IBM and Salesforce announce landmark global strategic partnership ...

Small nanoparticles have surprisingly big effects on polymer nanocomposites ...

Munich Leukemia Laboratory selects IBM Watson and Illumina for research collaboration to advance diagnostics and develop personalized treatment tools for leukemia & lymphoma ...

IBM researchers store data on world's smallest magnet - a single atom ...

IBM breaks industry record for conversational speech recognition by extending deep learning technologies ...

Designing the fuel-efficient aircraft of the future ...

The Cloud

NVIDIA and Microsoft boost AI Cloud computing with launch of industry-standard hyperscale GPU accelerator ...

Mellanox to showcase Cloud infrastructure efficiency with production-ready SONiC over Spectrum open Ethernet switches ...

AMD collaborates with Microsoft to advance open source Cloud hardware ...

Munich Leukemia Laboratory selects IBM Watson and Illumina for research collaboration to advance diagnostics and develop personalized treatment tools for leukemia & lymphoma

8 Mar 2017 Munich - Munich Leukemia Laboratory (MLL), a state-of-the-art leukemia and lymphoma diagnostic and research laboratory based in Munich, has teamed up with IBM and Illumina Inc. to help build a new cognitive technology prototype that aims to help researchers improve leukemia treatment.

The prevalence of leukemia is on the rise in Europe, with 15,000 new diagnoses each year in Germany alone. MLL will use NovaSeq technology from Illumina, a global expert in next-generation sequencing technology, to sequence samples from its biobank of more than 500,000 cases. MLL researchers then plan to use Watson to help analyze the genomic data alongside other data sources. The project intends to include innovative testing processes such as automated phenotyping and genotyping including whole genome sequencing (WGS) and transcriptome sequencing (RNASeq) in 5000 cases.

The ultimate goal is to develop a Watson-based technology prototype that can help analyze genomic and phenotypic data alongside medical literature, guidelines and study results, providing clinicians with information relevant to leukemia care. Following successful development, the tool could also be made available to other laboratories in the future.

Prof. Torsten Haferlach, co-founder and CEO of MLL, stated: "We at MLL are excited to combine our data and knowledge, IBM's cognitive computing tools, and Illumina's new sequencing platform to create a new era of insights in leukemia biology that will also drive more personalized treatment strategies."

"As a company committed to improving human health, we are delighted to welcome MLL as our first European customer to adopt the NovaSeq platform", stated Paula Dowdy, Senior Vice President and General Manager, Illumina, Europe, Middle East, and Africa. "MLL's strategic decision to create a future path for whole-genome sequencing to help promote better health outcomes, reflects one of Illumina's key strategies to connect genomics to the everyday lives of those living with cancer."

MLL will utilize Illumina's BaseSpace Informatics Suite to be able to streamline data analysis, storage, data curation and aggregation. The BaseSpace Sequence Hub Frankfurt site will help MLL manage the data as the project scales and facilitates data transfer to IBM Watson. Additional tertiary analysis with BaseSpace Cohort Analyzer and BaseSpace Correlation Engine allows MLL’s genomic data to be combined with other clinical data to enhance interpretation results.

"Cognitive computing is critical to help providers unlock the insights hidden in large data pools and scale their expertise in a global market through digital services", stated Bart de Witte, director of digital health, IBM. "This research collaboration is indicative of the growing global market to create and implement new cognitive approaches to data-driven challenges for health systems that are increasingly overwhelmed by data."

Source: IBM

Back to Table of contents

Primeur weekly 2017-03-13

Focus

Health-RI initiative to federate medical metadata across nationwide infrastructure ...

Crowd computing

Berkeley Lab supercomputer centre contributes to Planet Nine-seeking citizen science project ...

Major French bank now supporting humanitarian research through IBM's World Community Grid ...

NVIDIA Jetson TX2 enables AI at the edge ...

Quantum computing

Legacy of brilliant young scientist is a major leap in quantum computing ...

Focus on Europe

Addressing the gender gap in the UK HPC community ...

Middleware

Bright Computing supplies Bright Cluster Manager to Fox Chase Cancer Center ...

Hardware

E4 Computer Engineering and Wistron Corporation introduce new energy-efficient OCP platform based on IBM POWER CPUs coupled with NVIDIA Tesla Pascal GPUs with NVLink ...

Fujitsu in plans for RIKEN AIP-FUJITSU Collaboration Center ...

Bullion, high-end x86 server from Atos, beats worldwide performance record ...

Mellanox enables industry's first PCIe Gen-4 OpenPOWER-based Rackspace OCP server with 100Gb/s connectivity ...

Mellanox announces industry-leading OCP-based ConnectX-5 adapters for Qualcomm Centriq 2400 processor-based platforms ...

Supermicro's Silicon Valley state-of-the-art server and storage manufacturing facilities go green ...

AMD previews "Naples" high-performance server processor and prepares to return innovation and choice to the data centre in Q2 2017 ...

Applications

iRODS Consortium welcomes Intel as newest member ...

SDSC achieves record performance in seismic simulations with Intel ...

UC San Diego to develop cyberinfrastructure for NASA's ICESat-2 data ...

IBM and Salesforce announce landmark global strategic partnership ...

Small nanoparticles have surprisingly big effects on polymer nanocomposites ...

Munich Leukemia Laboratory selects IBM Watson and Illumina for research collaboration to advance diagnostics and develop personalized treatment tools for leukemia & lymphoma ...

IBM researchers store data on world's smallest magnet - a single atom ...

IBM breaks industry record for conversational speech recognition by extending deep learning technologies ...

Designing the fuel-efficient aircraft of the future ...

The Cloud

NVIDIA and Microsoft boost AI Cloud computing with launch of industry-standard hyperscale GPU accelerator ...

Mellanox to showcase Cloud infrastructure efficiency with production-ready SONiC over Spectrum open Ethernet switches ...

AMD collaborates with Microsoft to advance open source Cloud hardware ...