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Primeur weekly 2017-03-13

Focus

Health-RI initiative to federate medical metadata across nationwide infrastructure ...

Crowd computing

Berkeley Lab supercomputer centre contributes to Planet Nine-seeking citizen science project ...

Major French bank now supporting humanitarian research through IBM's World Community Grid ...

NVIDIA Jetson TX2 enables AI at the edge ...

Quantum computing

Legacy of brilliant young scientist is a major leap in quantum computing ...

Focus on Europe

Addressing the gender gap in the UK HPC community ...

Middleware

Bright Computing supplies Bright Cluster Manager to Fox Chase Cancer Center ...

Hardware

E4 Computer Engineering and Wistron Corporation introduce new energy-efficient OCP platform based on IBM POWER CPUs coupled with NVIDIA Tesla Pascal GPUs with NVLink ...

Fujitsu in plans for RIKEN AIP-FUJITSU Collaboration Center ...

Bullion, high-end x86 server from Atos, beats worldwide performance record ...

Mellanox enables industry's first PCIe Gen-4 OpenPOWER-based Rackspace OCP server with 100Gb/s connectivity ...

Mellanox announces industry-leading OCP-based ConnectX-5 adapters for Qualcomm Centriq 2400 processor-based platforms ...

Supermicro's Silicon Valley state-of-the-art server and storage manufacturing facilities go green ...

AMD previews "Naples" high-performance server processor and prepares to return innovation and choice to the data centre in Q2 2017 ...

Applications

iRODS Consortium welcomes Intel as newest member ...

SDSC achieves record performance in seismic simulations with Intel ...

UC San Diego to develop cyberinfrastructure for NASA's ICESat-2 data ...

IBM and Salesforce announce landmark global strategic partnership ...

Small nanoparticles have surprisingly big effects on polymer nanocomposites ...

Munich Leukemia Laboratory selects IBM Watson and Illumina for research collaboration to advance diagnostics and develop personalized treatment tools for leukemia & lymphoma ...

IBM researchers store data on world's smallest magnet - a single atom ...

IBM breaks industry record for conversational speech recognition by extending deep learning technologies ...

Designing the fuel-efficient aircraft of the future ...

The Cloud

NVIDIA and Microsoft boost AI Cloud computing with launch of industry-standard hyperscale GPU accelerator ...

Mellanox to showcase Cloud infrastructure efficiency with production-ready SONiC over Spectrum open Ethernet switches ...

AMD collaborates with Microsoft to advance open source Cloud hardware ...

Bright Computing supplies Bright Cluster Manager to Fox Chase Cancer Center


7 Mar 2017 San Jose - Bright Computing, a provider of hardware-agnostic cluster and Cloud management software, has supplied its Bright Cluster Manager solution to the Fox Chase Cancer Center for use in a new high-performance computing (HPC) cluster. The 30-node cluster supports bioinformatics initiatives for Fox Chase's world class cancer research programmes. Fox Chase focuses on RNA sequencing and variant calling in tumour samples, as well as clustered regularly interspaced short palindromic repeats (CRISPR) data processing, protein structure prediction and molecular modelling, and computational docking investigations for drug discovery. Fox Chase Cancer Center chose Bright Cluster Manager for its easy-to-use graphical user interface (GUI), which gives researchers point and click cluster management, rather than the traditional command line interface with which many researchers struggle.

HPC consultants at Data in Science Technologies (DST) worked with Fox Chase Cancer Center to develop a reference architecture and a toolset for the cluster that would help them meet their current and future research needs for conducting large scale simulations. DST originally selected Bright Cluster Manager to manage deployment of images on the new HPC cluster nodes. After deployment, DST was engaged as operational manager for the cluster, and continues to use Bright Cluster Manager for monitoring cluster health and basic cluster administration.

"We evaluated many cluster management tools and Bright was the obvious choice, especially since Fox Chase was transitioning from two different Linux systems", stated Debbie Willbanks, senior partner, at Data in Science Technologies. "Activities that are difficult in other cluster management tools are easy with Bright, providing a turnkey solution for cluster management. Using a GUI and a few mouse clicks, administrators can easily accomplish tasks that were previously command line driven and requiring numerous ad hoc tools. There is now consistency in our approach to any problem - glitches are easy to diagnose and solve."

According to Michael Slifker, senior programme analyst at Fox Chase's Biostatistics and Bioinformatics Facility, "Bright Cluster Manager helped meet the need for a smooth, seamless and expedited transition to our new cluster from the older cluster, which had become difficult to manage. This helped us meet our deadline for a very large and important research grant application. With Bright Cluster Manager, our researchers are much more efficient, while the ability to quickly provision new nodes makes the research team more productive. It all helps in our quest to provide excellent computational and bioinformatics resources for researchers at Fox Chase Cancer Center."

The Bright Cluster Management GUI was designed to offer an intuitive interface that is easy to use for beginners, while not compromising on efficiency and completeness for experienced users. The current demand for HPC administrators far outweighs the supply, so Bright helps bridge the gap. Now researchers can do what they do best - discover new drugs that save lives.

Source: Bright Computing

Back to Table of contents

Primeur weekly 2017-03-13

Focus

Health-RI initiative to federate medical metadata across nationwide infrastructure ...

Crowd computing

Berkeley Lab supercomputer centre contributes to Planet Nine-seeking citizen science project ...

Major French bank now supporting humanitarian research through IBM's World Community Grid ...

NVIDIA Jetson TX2 enables AI at the edge ...

Quantum computing

Legacy of brilliant young scientist is a major leap in quantum computing ...

Focus on Europe

Addressing the gender gap in the UK HPC community ...

Middleware

Bright Computing supplies Bright Cluster Manager to Fox Chase Cancer Center ...

Hardware

E4 Computer Engineering and Wistron Corporation introduce new energy-efficient OCP platform based on IBM POWER CPUs coupled with NVIDIA Tesla Pascal GPUs with NVLink ...

Fujitsu in plans for RIKEN AIP-FUJITSU Collaboration Center ...

Bullion, high-end x86 server from Atos, beats worldwide performance record ...

Mellanox enables industry's first PCIe Gen-4 OpenPOWER-based Rackspace OCP server with 100Gb/s connectivity ...

Mellanox announces industry-leading OCP-based ConnectX-5 adapters for Qualcomm Centriq 2400 processor-based platforms ...

Supermicro's Silicon Valley state-of-the-art server and storage manufacturing facilities go green ...

AMD previews "Naples" high-performance server processor and prepares to return innovation and choice to the data centre in Q2 2017 ...

Applications

iRODS Consortium welcomes Intel as newest member ...

SDSC achieves record performance in seismic simulations with Intel ...

UC San Diego to develop cyberinfrastructure for NASA's ICESat-2 data ...

IBM and Salesforce announce landmark global strategic partnership ...

Small nanoparticles have surprisingly big effects on polymer nanocomposites ...

Munich Leukemia Laboratory selects IBM Watson and Illumina for research collaboration to advance diagnostics and develop personalized treatment tools for leukemia & lymphoma ...

IBM researchers store data on world's smallest magnet - a single atom ...

IBM breaks industry record for conversational speech recognition by extending deep learning technologies ...

Designing the fuel-efficient aircraft of the future ...

The Cloud

NVIDIA and Microsoft boost AI Cloud computing with launch of industry-standard hyperscale GPU accelerator ...

Mellanox to showcase Cloud infrastructure efficiency with production-ready SONiC over Spectrum open Ethernet switches ...

AMD collaborates with Microsoft to advance open source Cloud hardware ...