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Primeur weekly 2014-03-24

Special

Crowd computing takes a closer look at the social life of molecules ...

Exascale supercomputing

Dongarra calls for renewed focus on research into high-end math ...

The Cloud

HP expands testing for mobile and Cloud-based application delivery ...

Kamal Osman Jamjoom Group LLC transforms performance management system with Oracle HCM Cloud ...

EuroFlash

HPC performance insight improves usage at Cardiff University ...

Early-Bird registration opens for International Supercomputing Conference ...

Europe's most powerful supercomputer cleared for users ...

Bright Computing expands product line to manage HPC, OpenStack, and Apache Hadoop clusters ...

World-renowned computational biophysicist, Klaus Schulten to deliver ISC'14 keynote ...

Innovative computer under scrutiny ...

Plans for world class research centre in the United Kingdom ...

2nd International Workshop on OpenCL full technical programme is now available ...

Excelian offers a fully managed compute Grid solution with pay-as-you-go infrastructure costs ...

Prêt-à-fabriquer: Real-time simulation of textiles ...

Follow the ant trail for drug design ...

CFAED presents the new microchip 'Tomahawk 2' at the DATE'14 in Dresden ...

USFlash

Cray to install China's first Cray XC30 supercomputer at Hong Kong Sanatorium and Hospital ...

Dot Hill storage products drill down to support oil & gas applications ...

The New York Genome Center and IBM Watson Group announce collaboration to advance genomic medicine ...

SDSC's Gordon supercomputer assists in whole-genome sequencing analysis under collaboration with Janssen ...

HP delivers powerful system with faster analytics engine for SAP HANA environments ...

Southern Methodist University announces name for new supercomputer: ManeFrame ...

Oregon physicists use geometry to understand 'jamming' process ...

NIST chips help BICEP2 telescope find direct evidence of origin of the universe ...

University of Idaho researchers gain new advantage with one of the nation's most powerful computers ...

Study finds forest corridors help plants disperse their seeds ...

Computer analyzes massive clinical databases to properly categorize asthma patients ...

Start-up focuses on reliable, efficient cooling for computer servers ...

The New York Genome Center and IBM Watson Group announce collaboration to advance genomic medicine

19 Mar 2014 New York - The New York Genome Center (NYGC) and IBM have launched an initiative to accelerate a new era of genomic medicine with the use of IBM's Watson cognitive system. IBM and NYGC will test a unique Watson prototype designed specifically for genomic research as a tool to help oncologists deliver more personalized care to cancer patients.

NYGC and its medical partner institutions plan to initially evaluate Watson's ability to help oncologists develop more personalized care to patients with glioblastoma, an aggressive and malignant brain cancer that kills more than 13,000 people in the U.S. each year. Despite groundbreaking discoveries into the genetic drivers of cancers like glioblastoma, few patients benefit from personalized treatment that is tailored to their individual cancer mutations. Clinicians lack the tools and time required to bring DNA-based treatment options to their patients and to do so, they must correlate data from genome sequencing to reams of medical journals, new studies and clinical records - at a time when medical information is doubling every five years.

This joint NYGC Watson initiative aims to speed up this complex process, identifying patterns in genome sequencing and medical data to unlock insights that will help clinicians bring the promise of genomic medicine to their patients. The combination of NYGC's genomic and clinical expertise coupled with the power of IBM's Watson system will enable further development and refinement of the Watson tool with the shared goal of helping medical professionals develop personalized cancer care.

The new Cloud-based Watson system will be designed to analyze genetic data along with comprehensive biomedical literature and drug databases. Watson can continually 'learn' as it encounters new patient scenarios, and as more information becomes available through new medical research, journal articles and clinical studies. Given the depth and speed of Watson's ability to review massive databases, the goal of the collaboration is to increase the number of patients who have access to care options tailored to their disease's DNA.

"Since the human genome was first mapped more than a decade ago, we've made tremendous progress in understanding the genetic drivers of disease. The real challenge before us is how to make sense of massive quantities of genetic data and translate that information into better treatments for patients", stated Robert Darnell, M.D., Ph.D., CEO, President and Scientific Director of the New York Genome Center. "Applying the cognitive computing power of Watson is going to revolutionize genomics and accelerate the opportunity to improve outcomes for patients with deadly diseases by providing personalized treatment."

Watson will complement rapid genome sequencing and is expected to dramatically reduce the time it takes to correlate an individual's genetic mutations with reams of medical literature, study findings, and therapeutic indications that may be relevant. The intention is to provide comprehensive information to enable clinicians to consider a variety of treatment options that the clinician can tailor to their patient's genetic mutations. It will also help NYGC scientists understand the data detailing gene sequence variations between normal and cancerous biopsies of brain tumours.

"As genomic research progresses and information becomes more available, we aim to make the process of analysis much more practical and accessible through Cloud-based, cognitive innovations like Watson", stated Dr. John E. Kelly III, Senior Vice President and Director of IBM Research. "With this knowledge, doctors will be able to attack cancer and other devastating diseases with treatments that are tailored to the patient's and disease's own DNA profiles. If successful, this will be a major transformation that will help improve the lives of millions of patients around the world."

The goal is to have the Watson genomics prototype assist clinicians in providing personalized genomic analytics information as part of a NYGC clinical research study. The solution has been under development for the past decade in IBM’s Computational Biology Center at IBM Research.

New York State is at the forefront of advancing medical science and commercialization. Governor Andrew M. Cuomo recently proposed $105 million to fund a partnership between NYGC and the University at Buffalo's Center for Computational Research to advance genomics research. This investment to enhance the state's genomic medicine capabilities, together with NYGC's acquisition of Illumina's state-of-the-art HiSeq X Ten whole human genome sequencing system, will accelerate the availability of valuable genomic information in New York.

"New York State’s investment in cutting-edge innovative industries is creating jobs and growing the economy in Western New York and across our state", stated Governor Cuomo. "This collaboration between the New York Genome Center and IBM will help make the region a new hub for the growing bio-tech industry."

IBM is NYGC's Founding Technology Member and will advance the organisation's goals of translating genomic research into clinical solutions for serious disease through the collaboration of medicine, science and technology. As biology increasingly becomes an information science, the promise of genomics is closer to reality with the help of data-driven analytics methods and more powerful computing systems. IBM and NYGC's computational biology experts are renowned for accelerating life sciences discoveries using deep analytical approaches and next generation information technologies.
Source: IBM

Back to Table of contents

Primeur weekly 2014-03-24

Special

Crowd computing takes a closer look at the social life of molecules ...

Exascale supercomputing

Dongarra calls for renewed focus on research into high-end math ...

The Cloud

HP expands testing for mobile and Cloud-based application delivery ...

Kamal Osman Jamjoom Group LLC transforms performance management system with Oracle HCM Cloud ...

EuroFlash

HPC performance insight improves usage at Cardiff University ...

Early-Bird registration opens for International Supercomputing Conference ...

Europe's most powerful supercomputer cleared for users ...

Bright Computing expands product line to manage HPC, OpenStack, and Apache Hadoop clusters ...

World-renowned computational biophysicist, Klaus Schulten to deliver ISC'14 keynote ...

Innovative computer under scrutiny ...

Plans for world class research centre in the United Kingdom ...

2nd International Workshop on OpenCL full technical programme is now available ...

Excelian offers a fully managed compute Grid solution with pay-as-you-go infrastructure costs ...

Prêt-à-fabriquer: Real-time simulation of textiles ...

Follow the ant trail for drug design ...

CFAED presents the new microchip 'Tomahawk 2' at the DATE'14 in Dresden ...

USFlash

Cray to install China's first Cray XC30 supercomputer at Hong Kong Sanatorium and Hospital ...

Dot Hill storage products drill down to support oil & gas applications ...

The New York Genome Center and IBM Watson Group announce collaboration to advance genomic medicine ...

SDSC's Gordon supercomputer assists in whole-genome sequencing analysis under collaboration with Janssen ...

HP delivers powerful system with faster analytics engine for SAP HANA environments ...

Southern Methodist University announces name for new supercomputer: ManeFrame ...

Oregon physicists use geometry to understand 'jamming' process ...

NIST chips help BICEP2 telescope find direct evidence of origin of the universe ...

University of Idaho researchers gain new advantage with one of the nation's most powerful computers ...

Study finds forest corridors help plants disperse their seeds ...

Computer analyzes massive clinical databases to properly categorize asthma patients ...

Start-up focuses on reliable, efficient cooling for computer servers ...