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Primeur weekly 2011-12-19

Special

SARA supercomputers today 600.000 times faster than its first 100 Mflop/s Cyber 205 supercomputer in 1983 ...

SC'11 bigger than ever ...

The Cloud

Atos leads the OPTIMIS project for the optimisation of services in Cloud ...

ISGC 2012 registration opens now ...

ConteXtream launches software-defined network virtualization solution for Cloud and hosting providers ...

BGI-BOX terminal server debut operation in China Agricultural University ...

Amazon Web Services launches Brazil data centres for its Cloud computing platform ...

Office 365 becomes first and only major Cloud productivity service to comply with leading EU and U.S. standards for data protection and security ...

EuroFlash

Counting the cost of research computing infrastructures ...

Bull taps Nimsoft to expand its Vision Services ...

ATLAS and CMS experiments present Higgs search status ...

New supercomputer for Bielefeld's high-energy physicists ...

Slovak Academy of Science selects IBM Power Systems and Storage for National Supercomputing Project ...

Multi-purpose photonic chip paves the way to programmable quantum processors ...

USFlash

Cray XMT supercomputer arrives at the Noblis Center for Applied High Performance Computing ...

SDSC welcomes 'Gordon' supercomputer as a research powerhouse ...

Triton resource helps track how kinesin molecules move ...

Astronomical amount of data travels across Western Canada to support space research ...

Jacket v2.0 for faster code in MATLAB ...

GPU-accelerated engineering simulation application to enable highest quality products for aerospace and other mission critical fields ...

BGI tackles DNA data deluge using NVIDIA Tesla GPUs ...

Chinese Ministry of Education to integrate CUDA programming curriculum in universities nationwide ...

NVIDIA opens up CUDA Platform by releasing compiler source code ...

High-energy physicists set record for network data transfer ...

Rogue Wave announces support for upcoming Intel Many Integrated Core architecture based products ...

Rogue Wave announces Stingray Studio 11.0 release ...

TotalView selected for China's National Supercomputing Centre in Shenzhen ...

New application makes supercomputing simple ...

HP enables organisations worldwide to expand data centre resources with HP POD ...

Oracle delivers record performance result for a two processor Intel-based system with TPC-C benchmark ...

Early black holes grew big eating cold, fast food ...

BGI-BOX terminal server debut operation in China Agricultural University

16 Dec 2011 Shenzhen - BGI, one of the world's largest genomics organisations, started the trail operation of "BGI-BOX", its first Cloud computing terminal server, in China Agricultural University on December 8. BGI-BOX is designed for users without bioinformatics background and it allows users to access bioinformatics analysis and genomic data in their own laboratories with the advantages of easy to use, high flexibility and user-friendly interface.

With the rapid development of high-throughput sequencing technology over the past ten years, the cost of DNA sequencing is decreasing much faster than data processing. Given that such research creates huge amounts of data, Cloud computing is becoming a favourable solution for large-scale bioinformatic analysis, both in terms of resource utilization, flexibility, and efficiency, as well as time and cost savings for massive data generation and computation.

"To meet the increasing demand for bioinformatics analysis, BGI has developed a high performance platform for researchers, comprising the distributed Cloud computing pipelines and tools", stated Ye Yin, Director of Research and Cooperation Division at BGI, "From the beginning of this year, BGI has conducted many testing and adjustment on the system in several different centres. I'm so excited that BGI-BOX has been successfully launched as scheduled. With this server, researchers could conduct the bioinformatics analysis with fast turnaround time and lower cost."

The system of BGI-BOX contains a series of BGI's standard bioinformatics analysis pipelines and software, including assembly tools, genetic variation analysis software, among others. There are two ways for remote users to easily access BGI's cluster computing and storage resources: one is logging on to BGI-BOX directly and locally, the other is logging on to BGI's computing centers by remote access. With this Cloud computing terminal server, users not only can perform basic bioinformatics analysis based on the genomic data, but also can conduct customized analysis on a variety of biological data sets by choosing relevant software and adjusting specific parameters under each analysis module.

"The debut performance of BGI-BOX is satisfactory. Many of our collaborators have expressed their willingness to install BGI-BOX in their labs in order to share and exchange data in a Cloud environment", stated Yin Ye. "In the first quarter of next year, we plan to install 50 BGI-BOXs worldwide to build a powerful and efficient cloud platform and support our partners with convenient access of bioinformatics analysis at hand", he added.
Source: BGI Shenzhen

Back to Table of contents

Primeur weekly 2011-12-19

Special

SARA supercomputers today 600.000 times faster than its first 100 Mflop/s Cyber 205 supercomputer in 1983 ...

SC'11 bigger than ever ...

The Cloud

Atos leads the OPTIMIS project for the optimisation of services in Cloud ...

ISGC 2012 registration opens now ...

ConteXtream launches software-defined network virtualization solution for Cloud and hosting providers ...

BGI-BOX terminal server debut operation in China Agricultural University ...

Amazon Web Services launches Brazil data centres for its Cloud computing platform ...

Office 365 becomes first and only major Cloud productivity service to comply with leading EU and U.S. standards for data protection and security ...

EuroFlash

Counting the cost of research computing infrastructures ...

Bull taps Nimsoft to expand its Vision Services ...

ATLAS and CMS experiments present Higgs search status ...

New supercomputer for Bielefeld's high-energy physicists ...

Slovak Academy of Science selects IBM Power Systems and Storage for National Supercomputing Project ...

Multi-purpose photonic chip paves the way to programmable quantum processors ...

USFlash

Cray XMT supercomputer arrives at the Noblis Center for Applied High Performance Computing ...

SDSC welcomes 'Gordon' supercomputer as a research powerhouse ...

Triton resource helps track how kinesin molecules move ...

Astronomical amount of data travels across Western Canada to support space research ...

Jacket v2.0 for faster code in MATLAB ...

GPU-accelerated engineering simulation application to enable highest quality products for aerospace and other mission critical fields ...

BGI tackles DNA data deluge using NVIDIA Tesla GPUs ...

Chinese Ministry of Education to integrate CUDA programming curriculum in universities nationwide ...

NVIDIA opens up CUDA Platform by releasing compiler source code ...

High-energy physicists set record for network data transfer ...

Rogue Wave announces support for upcoming Intel Many Integrated Core architecture based products ...

Rogue Wave announces Stingray Studio 11.0 release ...

TotalView selected for China's National Supercomputing Centre in Shenzhen ...

New application makes supercomputing simple ...

HP enables organisations worldwide to expand data centre resources with HP POD ...

Oracle delivers record performance result for a two processor Intel-based system with TPC-C benchmark ...

Early black holes grew big eating cold, fast food ...